Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMCGVVGIAGKSPVNQMLFDALTMLQHRGQDAAGIVTCHEGRLFLRKDNGMVRDVFHTRHMRALLGNYGIGHVRYPTAGSSSSAEAQPFYVNSPYGITLAHNGNLTNAEEIHDDLFKTDLRHMNTDSDSEVLLNVFAHELQKIGTLNPTPEDIFHTVSRVHERCQGAYGVVAMITGHGLVGFRDPNGIRPLIYGSRVTEQGEMEYIIASESVAITALGFKIERDIAPGEAIFINADGELFTKQCAANPKYRPCIFEYVYFARPDAIIDGISVYKARLKMGEKLAHKILRDWGEDHDIDVVIPIPDTSRTSALELANILGVKLREGFMKNRYIGRTFIMPGQQQRKKSVRQKLNPVELEFKGKNVLLVDDSIVRGTTCNEIIQMARDSGAKKVYFASAAPK----VMY-PNVYGIDMPAKTELIASERSVEEIQEIIGADRLIFQDLEDLKNAVRTSKVPTLTEFDCSVFDGIYVTGGIDADYLNNLEQKRNDSAKKKKDGYIDVNIDAASVDLTGIKEE
4RAD Chain:F ((126-185))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPR--YKPDFVGFEIPDK----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RAD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 171 -23847 -139.46 -458.60
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain F : 0.55

3D Compatibility (PKB) : -139.46
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.649

(partial model without unconserved sides chains):
PDB file : Tito_4RAD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RAD-query.scw
PDB file : Tito_Scwrl_4RAD.pdb: