Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGGMTMSQFDQSITLPSGVQLKNRLMLSPMTTQLSFFNGVITEDEITYYKQRSKGLGAVITGAANVQDIGKGWPGELSIAHDEMIPRLSELAKAIQGEGAKAIIQIFHGGRMTSRATLSGEQPVSASAVAAKR--------PDAETPRAMSEEEIVETIQAFGKATRRAIESGFDGIELHGANTYLIQQFFSPHSNRREDQWGGSLENRYRFIEELLTTVFSAVEQYAKKPFIVGYRFSPEEYETPGIR--FED-TIWLLERLRESKLDYLHVSLNMYDRIARSDKYNDKSILEVVHNTIQGKIPLVGVGGIRNREDVEQVLK-Y-AELAAIGQQMIVDPDWAEKLLENREDEFVTKPFEEAYKELYLPSPLYNFLKARYQ
4A3U Chain:B ((2-340))------PSLFDPIRFG-AFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRA-SAGLIISEATGISQEGLGWPYAPGIWSDAQVEAWLPITQAVHDAGGLIFAQLWHMGRMVPSNVS-GMQPVAPSASQAPGLGHTYDGKKPYDVARALRLDEIPRLLDDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIG-----KERTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGT--FGKTDQPKLSPEIRKVF--KPPLV-LNQDYTFETAQAALDSGVADAISFGRPFIGNPDLPRRFFEKAPLTK--DVIE---------------------


General information:
TITO was launched using:
RESULT:

Template: 4A3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2080 7027 3.38 21.55
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : 3.38
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_4A3U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A3U-query.scw
PDB file : Tito_Scwrl_4A3U.pdb: