Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEKDIERILISQEEIQVRCKELGKELTEIYQNTNP----LVVGVLKGAVPFMADIVRSIDTYLELDFMDVSSYGNATVSSGEVKIVKDLDTNVEGRDLLIVEDIIDSGRTLAYLVDLFKYRKAKSVKIVTLLDKPEGRVVNIEADYVGFNVPNEFVVGYGLDYAEAYRNLPYIGVLKPSVYQSN
4RHY Chain:B ((21-200))----DIKSVLLTAEQIQARIAELGEQIGNDYR----GQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYG------GVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVY---


General information:
TITO was launched using:
RESULT:

Template: 4RHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 816 -20134 -24.67 -122.77
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.86

3D Compatibility (PKB) : -24.67
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_4RHY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RHY-query.scw
PDB file : Tito_Scwrl_4RHY.pdb: