Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MLNLKSSHST------AFTPSSPAERYAEALASG-QFMADEAQAQAVQELDRVWKELLNRYKASKKAFRRFRRQTSPKGVY---MWGSVGRGKTWLMDQFYESVPFRRKTRMHFHHFMQHVHKELNKLSGQRNPLDIVADQIYKDAVVICFDEFFVSNVTDAMILSDLFQKLFVRGVTLIATSNIAPDGLYKN----GIHRDRFIPTIEMVKKNCVVLNVDAGVDYRLRVLKQAQLFKSPLGNEAQSWISECYTALTHTQTNSHEPIVINNRVVETLGHTEDVLWCEFSELCLKPRSPAD----FIEIANIYNTVLVSNVPHLTDFLSEGTRRFIYLVDEFYDRGVKLLLTSQDSIIDIYQGEKLAFEIERTRSRLLEMQSDEYLHSEHRHIDATKTS
5I3E Chain:A ((9-356))MAISPRDEQNRSVDLWFAYKVPKLTKDADSDSASGYEYVYYDRQVGAVQKSPNLMNDPKGALFYTLDSVFGDPGDTTGWILYNDEMPADANRSNNATLGHTKGVIAFDIASS----SALWLLHSWPKYASPSVVPTPLYG----QTFLCLSLDLATAGKLAAQMALHQQPQVYLPRTGGLDHTSPLYALTQPLNASAPGDSDSLDFKTRGGVPFKVIAKNRKWGKDFWNDLVGPT--LKADMYVE--TWIR-----------GKIPPVLDSDGVHKTY----DIKFIDLRKLGAPWAWPETQDHAKWGITTTDNWVCVGDINRMVTQEKRG--------------GGTIAFQDPKLWKALCETDLIIPPPGKT-----DAQARAMIRKTHEP-------


General information:
TITO was launched using:
RESULT:

Template: 5I3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1928 70219 36.42 214.74
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 36.42
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.078

(partial model without unconserved sides chains):
PDB file : Tito_5I3E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5I3E-query.scw
PDB file : Tito_Scwrl_5I3E.pdb: