Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MSEKLQKVLARIGLGSRRYMEEVIAAGRVSVNGRVAQVGERIEPGDELRIDGRKVQFQIEDEIRRRVLIYYKPEGEICSRNDPEKRPTVFDHLPQIANDRWVMVGRLDINSTGLLLFTNDGELANRLMHPSNEIEREYAVRVMGEVTPQLRQNMVNGVELEDGPAKFESFSEIGGEGINRWYQVVVKE--GRNREVRRIFESQG----LKVSRLLRTRYGTVILPRELRTGRWMELDKTDIDNLAKSVELKPRQGTGLFGMAKRR------TERMTEKPMAARRGGYLRQQRRDDEKEAPANTGNQRKS--TGFNRGFKKF
4F3V Chain:A ((1-275))GHMTDRLASLFESAVSMLPMSEARSLDLFTEITNYDESACDAWIG-RIRCGDT------------DRVTLFRAWYSRRNFGQLSGSVQIS-----MSTLN----------ARIAI-----------GGLYGDITYP---VTSPLAIT-MGFAACEAAQG-----NYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEAC---ARAIAWYLAMARRSQGNESAAVALLEWLQTTHPEPKVAAALKDPSYRLKTTTAEQIASRADPWDPGSVV-


General information:
TITO was launched using:
RESULT:

Template: 4F3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1287 45934 35.69 180.13
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 35.69
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.282

(partial model without unconserved sides chains):
PDB file : Tito_4F3V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F3V-query.scw
PDB file : Tito_Scwrl_4F3V.pdb: