Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDRNIDQELVSIIIPTHNRYESLIRAVKSCLHQSYKN---IEVIIIDDNYSNVNLRNKIIH--Q-FGYTN--HRIKLILSNEDLGATNARNIGIKNS----RGKYISFLDDDDEYMPDRILKLMACFKKSRMKNLALVYSYGIIIYPNGTREE----EKT---------------DFVGNP---------LFVQM-VHNIAGTSFWLCKKEVLELINGFEK-IDSHQDGVVLLKLLAQGYQIDIVREFLVNYYAHSKENGITGVTQKTINADEEYYNYCRKYFNLLSFNERILVTKKYYSLNIKRLLLIGDKCKALKVIKKAREEKIFNEFLFLKYMLLYNFSFFYCIYDNYVQLKFRK
4FIX Chain:A ((176-422))---APGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKV-----RDHPDFPAAAARLGSRLSI-HDQPNLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAK--APMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLPGAAIWHMAWSDK-----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4FIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 958 -33586 -35.06 -163.83
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -35.06
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.384

(partial model without unconserved sides chains):
PDB file : Tito_4FIX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FIX-query.scw
PDB file : Tito_Scwrl_4FIX.pdb: