Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANRKIVVALGGNAILSSDPSAKAQQ--EALVETAKHLVKLIKNGDDLIITHGNGPQVGNLLLQHLASDSEKNPAFPLDSLVAMTEGSIGFWLKNALQNALLDEGIEKNVASVVTQVVVDKNDPAFVNLSKPIGPFYSEEEAK--AEAEKSGATFKEDAGRGWRKVVASPKP-------VDIKEIETIRTLLNNGQVVVAAGGG-GIPVVKENNGHLTGVEAVIDKDFASQRLAELVDADLFIVLTGVDYVFVNYNK-PNQEKLEHVNVAQLEEYIKQDQFAPGSMLPKVEAAIAFVNGRPEGKAVITSLENLGALIESESGTIIEKG
4JZ9 Chain:A ((3-316))SAGKTVVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAAA-GVSPEMPLHVCGAMSQGFIGYMMSQAMDNVFCANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFYT-EQEAKDLMAANPGKILRED--AGR-----GWRVVVPSPRPLEIVEYGVIKTLID-NNVLVICTNGGGIPCKRE-NKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACI-NYKKPDERKLEEIKLSEILALEKDGHFAAGSMGPKVRAAIEFTQ-ATGKMSIITSLSTAVDALNGKCGTRIIK-


General information:
TITO was launched using:
RESULT:

Template: 4JZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1628 29451 18.09 97.84
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : 18.09
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.545

(partial model without unconserved sides chains):
PDB file : Tito_4JZ9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JZ9-query.scw
PDB file : Tito_Scwrl_4JZ9.pdb: