Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVMFTLKQFQYFIKIVEEGSFTAASEKLFIAQSALSRQMKLLEEEIDFLLFDRTDKRVKLTAAGEVFYKKIKDNLL-YLNEIIDLSKSVSEGKNRQIKIAHSSSIVVDNTKVQILKEVSLTQQLSFEINTLSSEQQILALLNGEIDIGLIRPPVRHTLDGINTLKL-YEEPLMVAVHIDHAKFAKSEKVYLKDLKDEC-FVSTPHAERGGLSYLVANLCLAAGFTPQKASIQSRKISQ-LQL-VAANLGVGIVPAEFQQ--ILPANVKL-IPLEDSLSLSEVLLVYRKDH--DEIIQHCAEQIHQMFLS
3FZV Chain:A ((4-300))---YTLRQLKYFVTTVECGSVAEASRKLYIAQS-ISTAVKGLEESFV---------QLFLTPAGARFYRKAQELLRMAHEFEQNLADN--DVIAGQIDIGCFETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEH--DLDSTIETEPLMPPQRPHALLPEGH-RFAGQAQVSLRDLCLEPMILLDVQPSRTYFVSLFEE----LGLTPNIAFSSPSI--EMVRGMVGQGFGFSLLVTRPHSECTYDGKKVVMVDLAEPVSTSGLAAAWLKRAQLTKPARLFVDYCREQLGK


General information:
TITO was launched using:
RESULT:

Template: 3FZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1252 -18385 -14.68 -66.85
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -14.68
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.389

(partial model without unconserved sides chains):
PDB file : Tito_3FZV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FZV-query.scw
PDB file : Tito_Scwrl_3FZV.pdb: