Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEICPRTR
3Q8Y Chain:B ((1-137))--MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEIT----


General information:
TITO was launched using:
RESULT:

Template: 3Q8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 642 -71689 -111.67 -523.28
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.88

3D Compatibility (PKB) : -111.67
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.465

(partial model without unconserved sides chains):
PDB file : Tito_3Q8Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q8Y-query.scw
PDB file : Tito_Scwrl_3Q8Y.pdb: