Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVVAWHRPTKAVIHKKAITENVANEVARLPQGKELFAVVKANGYGHGAIETAEAAVAGGASGFCVSNLDEGVELREAGFTQPILILNMVPYDALTVAVAHDLSVTAGTREWLQAAAAV-LEKSKLETPLSIHLKADTGMGRIGFCTPE-EVKEAAAFIKESRVLEWEGLFTHFSTADQADDTYWNLQKERFIEVLKKLPELP-RYVHVSNSATALWHDETIGNMIRYGVAMYGLNPSGHA-LPEVYPLQPALELVSELIQVKKLPAGEGIGYGETYITPEAEWIGTIPIGYADGWPRKMQGFSLLVEGNYCETIGRVCMDQLMIRLPQEFPVGTKVTLIGKNADKEITMQDIADQLGTIHYEVACGLGQRIPREYQE
4A3Q Chain:B ((2-370))-SDKYYRSAYMNVDLNAVASNF-KVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGE--QEKKLWLHIKLDTGMGRLGIKD-TNTYQEVIEIIQQYEQLVFEGVFTHF----------TTEQYQRFKDMVNEA--IKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANVVQTKTL----------------PTTIALLPIGYADGYLRIMQGSFVNVNGHQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIYHD


General information:
TITO was launched using:
RESULT:

Template: 4A3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1907 -104627 -54.86 -307.73
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -54.86
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_4A3Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A3Q-query.scw
PDB file : Tito_Scwrl_4A3Q.pdb: