Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAELKQEWINTAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIE--NASFGLTNCAERTAFFKAVSEG--EKTFTHLVVAGHTPDPISPCGACRQVMAEFCSPDMPVTLVGDNGVTKATTVRALLPYAFTEKDL-
1JTK Chain:A ((1-131))--MNRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENA--AYSMCNCAERTALFKAVSEGDT--EFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSEDLH


General information:
TITO was launched using:
RESULT:

Template: 1JTK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 664 -41535 -62.55 -329.64
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : -62.55
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_1JTK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JTK-query.scw
PDB file : Tito_Scwrl_1JTK.pdb: