Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceRRMCILTLAEKTQNPEKPNFLEDTYQEVEAPAAAMLSYGGHEIHFELDKNCWPRLRHGS-----AVPPGYSA----HIYSEGSDKYPPTSAVIEGTHVQKLPGFNPKGNVRFYEKLIGLS
5K71 Chain:A ((7-93))----------QIQHIAIVGCVHGKYREMYRQLSEYEKSTGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNH-----------------------


General information:
TITO was launched using:
RESULT:

Template: 5K71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 234 4732 20.22 60.66
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 20.22
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.098

(partial model without unconserved sides chains):
PDB file : Tito_5K71.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5K71-query.scw
PDB file : Tito_Scwrl_5K71.pdb: