Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNKKTRQTLIGLLVLLLLSTGSYYIKQMPSAPNSPKTNLSQKKQASEAPSQALAESVLTDAVKSQIKGSLEWNGSGAFIVNGNKTNLDAKVSSKPYADNKTKTVGKETVPTVANALLSKATRQYKNRKETGNGSTSWTPPGWHQVKNLKGSYTHAVDRGHLLGYALIGGLDGFDASTSNPKNIAVQTAWANQAQAEYSTGQNYYESKVRKALDQNKRVR--YRVTLYYASNEDLVPSASQIEAKSSDGELEFNVLVPNVQKGLQLDYRTGEVTVTQ
5FGU Chain:A ((377-518))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLITGTRTQNVGNNDRKGGMQYIENKVLDHIKRNPKVHVYYKATPVYQGSE-LLPRAVLVSALSSDGFIDETVRVFNNVAGFNIDYQNG------


General information:
TITO was launched using:
RESULT:

Template: 5FGU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 314 6086 19.38 70.76
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 19.38
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_5FGU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FGU-query.scw
PDB file : Tito_Scwrl_5FGU.pdb: