Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLAAFEAFVKVMETGSISVAADQLFITQPAVTKRIHSLEEYFGVKLFESAGRGVQATHAAHSLLPKVKSWLNELRDIHHTLSHEQTQIQGRLKIGTSHHIGLHHLPAPLKHFVQQFPQVTLDVHFVDSEQAHEQVLAGDLELAFLTLPPSGDERLNYITIWNDPLVFVAAPFHPLAQKKN--LILQDLIE-----YPSL-LPAAQTYTAQITLAEFEKQCLKPKITMSNNPLESIRMLVSIGLGWSVLPKTLLNQDMQQLDLNVEMNRQLGMVWHPARTQSRAMQELIKMMQE
3K1P Chain:A ((1-256))MELRHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLERGSRPVKTTPEGHFFYQYAIKLLSNV-DQMVSMTKRIASVEKTIRIGFVGSLLFGLLPRIIHLYRQAHPNLRIELYEMGTKAQTEALKEGRIDAGFGRLKIS-DPAIKRTLLRNERLMVAVHASHPLNQMKDKGVHLNDLIDEKILLYPSSPKPNFSTHVMNI----FSDHGLEPTKINEVRKVQLALGLVAAGEGISLVPAS--TQSIQLFNLS------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3K1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 861 -51128 -59.38 -206.16
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -59.38
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_3K1P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3K1P-query.scw
PDB file : Tito_Scwrl_3K1P.pdb: