Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARMAKVVELPSIAKIDKSKGKISAQLTQALREAVQSGDLQPGDPLPSSRELALTLGVARGTIIEAYDQLLAEGVFDSQPRTGTYVSHALVKTSAIQHSSKENKPNSISLNKSARSYAKVLDEFKPLPHVPFAVSVPIARTQPSDIWRKFGNKFRSRGAGVPSGYGEPQGVLSLRIAIADYVRRSRSVHCEPEQIVITPSIQQSLYICNQILFEAKDEVW-VEDPAYRGTTAIFEHTVQNIRMVRVPVDEEGIQIETGIKLSKQASAAFVTPSHQYPLGMPMSLARRTALLAWAKQQ-NAWIIEDDYDSELRYNGQPFPSLQGMAPDQ-AIYLGTFSKVLFPSLRLGYAVLPKELVAPFCGLRVLIDRHPPAADQHVLAAFIQEGYLERHIRRTRNVYAEVREYIIGLIEKYIPQELAWLQLGDQGMHMVLWLAQHINDIDVASSAVDAGIAIKAISPTFSKERRRS----GLIVGLGDFEPELMQQAIKKLSKIIQQHAKSM
5X03 Chain:B ((16-364))----------------------------------------------------------------------------------------------------------------------------------------------PIKSWFRCEQKAASRSYRTLGDMSHPQGIYEVRAAITRLISLTRGVKCRPEQMIIGAGTQVLMQLLTELL--PKEAVYAMEEPGYRRMYQLLKNAGKQVKTIM--LDEKGMSIAEITR--QQPDVLVTTPSHQFPSGTIMPVSRRIQLLNWAAEEPRRYIIEDDYDSEFTYDVDSIPALQSLDRFQNVIYMGTFSKSLLPGLRISYMVLPPELLRAY-KQRGYDLQTCSSLTQLTLQEFIESGEYQKHIKKMKQHYKEKRERLITALEAEFSGEVT-VKGANAGLHFVTEFDTRRTEQDILSHAAGLQLEIFGMSRFNLKENKRQTGRPALIIGFARLKEEDIQEGVQRLFKAVYGH----


General information:
TITO was launched using:
RESULT:

Template: 5X03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1731 -31132 -17.98 -91.03
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : -17.98
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_5X03.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5X03-query.scw
PDB file : Tito_Scwrl_5X03.pdb: