Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRIALLDYGMGNLHSAAKALE-----YVGATVDVTNDPKLIAQADKIVFPGVGAMRDCMQGMREAGIDEVVRKAAFN-KPVLAICVGMQALLQSSEENGGVDALGIFDGVVKHFPQMEGLKVPHMGWNQVHQMDPSHPMWNNIEQDARFYFVHSYYVEPKDENLVAATCEYGVNFCTAIHKDNLFATQFHPEKSHTAGLQLLKNFVEWNI
1KXJ Chain:A ((4-200))--RIGIISVGPGNIMNLYRGVKRASENFEDVSIELVESPR-NDLYDLLFIPGVGHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLSLIEGNV---VKLRSRRLPHMGWNEV--------IFKDTFPNGYYYFVHTYRAVCEEEHVLGTTEYDGEIFPSAVRKGRILGFQFHPEKSSKIGRKLLEKVIECSL


General information:
TITO was launched using:
RESULT:

Template: 1KXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1093 21192 19.39 110.95
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : 19.39
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_1KXJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KXJ-query.scw
PDB file : Tito_Scwrl_1KXJ.pdb: