Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRSEKSKDTKARLAPKQKISYEKKPDPAITAYAVQSLNWLRQAEFLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSLGNPDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHPLQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDFSIQLFSSLNKLGLEELASVMAGRLHFTLEQQPEFDVDAIPEASDEDAEE
3PQC Chain:A ((25-192))--------------------------------------------------------------EVAFVGRSNVGKSSLLNALFNRK-IAFVSKTPGKTRSINFY-LVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYG-EYTIIPTSSVTGEGISELLDLISTLL-------------------------


General information:
TITO was launched using:
RESULT:

Template: 3PQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 750 -107598 -143.46 -640.46
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -143.46
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_3PQC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PQC-query.scw
PDB file : Tito_Scwrl_3PQC.pdb: