Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFDHIAQPISYQHIELSFPVHLDIKRLDLVHPQISGNKFFKLKYNLLAAKEQGLSSILTFGGAYSNHIAATAYAAHLFGLKSIGIIRGEELAGKPLNPTLAKAQSLGMQLHFVSRHEY--RLRDEANYLKQL----QQQFPQTYIIPEGGTNELAVQG-----------CQEILSQYDLEQYDVICCAVGTGGTISGL-----------------IERSAAHQKVLGFSALKGDFLQQEIK---QWTKKQNWSLTDVYCWGGYAKTSPELFTFIENFEEQYTVPLEPIYTGKMMFGLFDLIKNNYFPANTRILAIHSGGLQADIRNRSHA
4D9E Chain:A ((51-334))-----------------------IKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALL--ENPIGTTAENYLTNGNRLLLDL-FNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVGGSSALGAMGYVESALEIAQQCEEVVG------LSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSRSVAEQKP------KVIALQQAIAGQLALTATADIHLWDDYFAPGYGVPNDAGMEAVKLLASLEGVLLDPVYTGKAMAGLIDGISQKRFNDDGPILFIHTGGAPA--------


General information:
TITO was launched using:
RESULT:

Template: 4D9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1253 -32799 -26.18 -132.79
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -26.18
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_4D9E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D9E-query.scw
PDB file : Tito_Scwrl_4D9E.pdb: