Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALTEYKIKVVDANNQPLLNFPMATRYVGSDKKNNKLTSDTDGVLTFQSDGRAVEVFVLAPIDKNGQPDMTKFKEDNDNDNAYYRITTINVSRNVPSSIKSPYLLTDYGIAKTKFIFYENEQDKKIYSVPLTVKVSYLVGETKTSPKFIEAIQEVKNGELNITSILHSRIQVHPFKPDNTPFKTPQGYTPRSTTPITLPVYFDIKSNNATTEPDEPSIDQPVKKVLCTCNRDITEAEFKLITKNKIAVTFLNALNEQFKKLNMNICLEKAHFIAQTLHETA-------------SYTLLEEGLK------PGVQEKDVYDGYKGRGLMQITYKKNYEAYGKAVGENFLGENKHRVAKEKKHAVGSAIWYWNHSKAGNLSIYAI--------KNDLIAT--------TSLINGGYN-------GFDDRLQYYKKAVSAFNIKQCPNLEKKIINKLDDYTAFEDSYIYSKKAGESFGWGLWNDPKGGKHGKTANPVEAKKGYQRFLEMSKGVTFPFGYKLNKQKEKISRKRYGYSADSAKALAEKRVKEL
1DXJ Chain:A ((56-235))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVAAFLAQTSHETTGGAAGSPDGPYAWGYCFVTERDKSNKYCDPGTPCP-AGKSYYGRGPIQLTHNYNYAQAGRALGVDLI-NNPDLVARDAVISFKTAIWFWMTPQGNKPSCHDVITNRWTPSAADVAANRTPGFGVITNIINGGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNCR---------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1DXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 557 27750 49.82 201.08
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 49.82
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.292

(partial model without unconserved sides chains):
PDB file : Tito_1DXJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DXJ-query.scw
PDB file : Tito_Scwrl_1DXJ.pdb: