Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHKAKSK
3C9K Chain:A ((15-115))---------------KSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVL-------------


General information:
TITO was launched using:
RESULT:

Template: 3C9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 285 -36832 -129.24 -364.67
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.93

3D Compatibility (PKB) : -129.24
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.617

(partial model without unconserved sides chains):
PDB file : Tito_3C9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C9K-query.scw
PDB file : Tito_Scwrl_3C9K.pdb: