Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceEMDPPAAEVNDKLRDMPDGTFLVRDASTKMQGDYTLTLRKGGNNKLIKIYHRDGKYGFSDPLTFNSVVELINHY
2PNA Chain:A ((26-97))--DISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFNSVVELINHY


General information:
TITO was launched using:
RESULT:

Template: 2PNA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 232 -10788 -46.50 -149.83
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.96

3D Compatibility (PKB) : -46.50
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.631

(partial model without unconserved sides chains):
PDB file : Tito_2PNA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PNA-query.scw
PDB file : Tito_Scwrl_2PNA.pdb: