Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKSMVAREAKRQKIVDRYAEKRAALKA------AGDYE------GLSKLPRNASPTRLHNRCRVTGRPHSVYRKFGLSRIAFRELAHKGQIPGVTKASW
4ADV Chain:N ((1-100))-AKQSMKAREVKRVALADKYFAKRAELKAIISDVNA----RWNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW


General information:
TITO was launched using:
RESULT:

Template: 4ADV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain N - contact count / total energy / energy per contact / energy per residue : 227 17877 78.75 212.82
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain N : 0.80

3D Compatibility (PKB) : 78.75
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.624

(partial model without unconserved sides chains):
PDB file : Tito_4ADV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ADV-query.scw
PDB file : Tito_Scwrl_4ADV.pdb: