Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKMKYYEETSALLHEFSEENQKYFEELWESFNLAGFLYDEDYLREQIYLMMLDFSEAERDGMSAEDYLGKNPKKIMKEILKGAPRSSIKESLLTPILVLAVLRYYQLLGDFSK--GPLLTVNLLTFLGQLLIFLIGFGLVATILRRSLVQDSPKMKIGTYIVVGTIVLLVVLGYVGMASFIQEGAFYIPAPWDSLSVFTISLVIGIWNWKEAVFRPFVSMIIAHLVVGSLLRYYEWMGISNVFLTKVIPLAVLFIGIFLLFRGFKKIKWSEVQSKSRCKAVFCYNEGKNVRN
5VKQ Chain:B ((1410-1538))--------------------------------------------------------------------------------------------LLACVQILDFLSFHHLFGPWAIIIGDLLK-DLARFLAVLAIFVFGFSMHIVALNQSFANFSPE------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5VKQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 29 -2966 -102.28 -49.43
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.49

3D Compatibility (PKB) : -102.28
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.49
QMean score : 0.049

(partial model without unconserved sides chains):
PDB file : Tito_5VKQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5VKQ-query.scw
PDB file : Tito_Scwrl_5VKQ.pdb: