Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHTQMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLDKEGNRIVKIDASLPLEQVVETTNAVLFDGMGLAK
4HDC Chain:A ((4-194))-----FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEGN--DMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERII----------DQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDT------------


General information:
TITO was launched using:
RESULT:

Template: 4HDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 855 -68637 -80.28 -377.13
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -80.28
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_4HDC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HDC-query.scw
PDB file : Tito_Scwrl_4HDC.pdb: