Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRSQLTILTNICLIEDLETQRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKNWPLDTGGRYIVI-CYKATEFSGTLQSSEEGEVSWVQKDQIPNLNLAYDMLPLMEMMEAPDKSEFFYPRRTEDDWEKKIF
2RRK Chain:A ((21-132))---------------------KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQ--REVSGRIIHLHAWHVPDFHGTLQAHEHQALVWCSPEEALQYPLAPADIPLLEAFMA---------------------


General information:
TITO was launched using:
RESULT:

Template: 2RRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 459 -26847 -58.49 -241.86
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -58.49
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.377

(partial model without unconserved sides chains):
PDB file : Tito_2RRK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RRK-query.scw
PDB file : Tito_Scwrl_2RRK.pdb: