Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIYAGILAGGTGTRMGISNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKYLPLYKERIIITKGGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDAVDTVVEAVDTIVESTNGQFITDIPNRAHLYQGQTPQTFRCKDFMDLYGSLSDEEKEILT--DACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMIEKD
5HS2 Chain:A ((7-226))-----IPAAGQGKRMK-AGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDY-P-FQTSIELVAGGDERQHSVYKGLKAV------KQEKIVLVHDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKRVQDLQ-VSETIERSSLWAVQTPQAFRLSLLMKAHAEA--ERKGFLGTDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTSAEAIMESE


General information:
TITO was launched using:
RESULT:

Template: 5HS2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1038 -84880 -81.77 -389.36
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -81.77
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_5HS2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HS2-query.scw
PDB file : Tito_Scwrl_5HS2.pdb: