Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLDGYTRLAAVVANPIKHSISPFIHNRAFEATATNGAYVAWEIEASDLVETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEARLIGAVNTVVNENGNLIGYNTDGKGFFKCL--PSFTISGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVS-MEKTRPYLDKLQEQTGFKVDLCALEYVSELQARIAESDLLVNATSVGM---DGQSSPVPENIVLPETLLVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKYQ
3T4E Chain:A ((32-308))-------ELIGLMAYPIRHSLSPEMQNKALEKAGLPYTYMAFEVDNTTFASAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPE-LLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFELWTGKAFPLDYVKQVM-----


General information:
TITO was launched using:
RESULT:

Template: 3T4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1574 -62151 -39.49 -229.34
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -39.49
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_3T4E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3T4E-query.scw
PDB file : Tito_Scwrl_3T4E.pdb: