Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRIENLSVSYKDTLALKDISLVLHGPTITGIIGPNGAGKSTLLKGMLGII-PHQGQAFL-------DDKEVKKSLHRIAYVEQKINIDYNFPIKVKECVSLGLFPSIPLFRSL-KAKHWKKVQEALEIVGLADYAERQISQLSGGQFQRVLIARCLVQEADYILLDEPFAGIDSVSEEIIMNTLRDLKKAGKTVLIVHHDLSKIPHYFDQVLLVNR-EVIAFGPTKETFTETNLKEAYGNQLFFNGGDL
5X3X Chain:A ((20-230))---------------ALDDLSLAVPKGESLAILGPNGAGKSTLLLHLNGTLRPQSGRVLLGGTATGHSRKDLTGWRRRVGLVLQDAD-DQLFATTVFEDVSFG-----PLNLGLSEAEARARVEEALAALSISDLRDRPTHMLSGGQKRRVAIAGAVAMRPEVLLLDEPTAGLDLAGTEQLLTLLRGLRAAGMTLVFSTHDVELAAALADRVALFRTGRVLAEGAAEAVLSD------------------


General information:
TITO was launched using:
RESULT:

Template: 5X3X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 960 -12232 -12.74 -60.85
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -12.74
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_5X3X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5X3X-query.scw
PDB file : Tito_Scwrl_5X3X.pdb: