Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIPLLTFARHKFVYVLLTLLFLALVYRDVLMTYFFFDIHAPDLAKFDGQAIKNDLLKSALDFRILQFNLGFYQSFIIPIIIVLLGFQYIELKNKVLRLSIGREVSYQGLKRKLTLQVASIPCLIYLVTVLIIAIITYFFGTFSPLGWNSLFSDGSGLQRLLDGEIKSYLFFTCVLLIGIFINAIYFLQIVDYVGNVTRSAITYLMFLWLGSMLLYSALPYYMVPMTSLMQASYGDVSLMKLFTPYILYIVPYMVLEKYEDNV
4L6R Chain:A ((245-268))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSFFSLYLGIGWGA-PMLFVVPWAV-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4L6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 11 -2601 -236.45 -108.38
target 2D structure prediction score : 0.29
Monomeric hydrophicity matching model chain A : 0.37

3D Compatibility (PKB) : -236.45
2D Compatibility (Sec. Struct. Predict.) : 0.29
1D Compatibility (Hydrophobicity) : 0.37
QMean score : 0.085

(partial model without unconserved sides chains):
PDB file : Tito_4L6R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4L6R-query.scw
PDB file : Tito_Scwrl_4L6R.pdb: