Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEESKELNAVIDVIMLAGTILLKSGSEIHRVEDTMIRIAHSQGIVDCNVLAMPAAIFFSIENTNISRMKRVTSSSYNIEKVCDVNQISRQLVGGQIDLETAFKQLTALQAQPLPYTKLQVTLAATFSAPFFSVMFSGNIYDALGAGVATLFGFAFSLYVEKFIRIPFVTAFAGAFVFGIIAQFWARYTGFPSTADLIIAGAVMPFVPGIALTNAVRDIMTNHINSGMSKMFESLLITLALGAGTSVALVLMN
1VP7 Chain:C ((23-50))-------------------------------------------------------------------------------ALAELESLVSAMENGTLPLEQSLSAYRR-------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VP7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 31 -3402 -109.73 -121.48
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain C : 0.43

3D Compatibility (PKB) : -109.73
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.43
QMean score : 0.696

(partial model without unconserved sides chains):
PDB file : Tito_1VP7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VP7-query.scw
PDB file : Tito_Scwrl_1VP7.pdb: