Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPKIKPIKLVIIVVCIAIIAVLAWKFLKPKQQQPQYITAEVTRGDIENNVLATGTLDATKLISVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTSDANIKNLEAQRLQQVASLNEKQLEYRRQQQMYAQDATPRADLESAEAAYKTAQAQVKALDAQIE--SAKVTRSTAQTNIGYTRIVAPTDGTVVAIVTEEGQTVNANQSAPTIVKIAKLQNMTIKAQVSEADIMKVEKGQQ--VYFTTLGDETKRYATLRQIEPAPDSISSESNSTTSSTTSSAVYYNALFDVPNTDGKLRIDMTAQVYIVLNSAKNALLVPSSALSSKQFSGQRKQQGQSADKASSTPSAERKHQGNGARLERLNLTPEQKQLIEQGKATLSVVRVLQADGTTKPTQILVGINNRVNAQVLAGLKQGDQVVIADSSENSAASANSGNNRRRGPMGM
3LNN Chain:A ((45-300))------------------------------------------------NLPAMIEADPAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDS---------ADLAQANSDAAKARAAMTMARRNLD--RQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGGHILAVRSPINGRVVDLNAATG--AYWNDTTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDD------------PQPGKVRYVGQILDADTRTTKV--RMVFD--NPDGRLRPGMFAQATF-LSQPHEGIVVPMSAIVQSGF--------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3LNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1011 6031 5.96 23.93
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 5.96
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_3LNN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LNN-query.scw
PDB file : Tito_Scwrl_3LNN.pdb: