Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKQYMTHRCLIAPPEMADDFFANTVIYLARHDEEGAQGIIINRPAGIQIKELLNDLDIDADN----VNPHEVLQGGPLRPEAGFVLHTGQP-TWHSSIAVGENVCITTSKDILDAIAHNEGVGRYQIALGYASWGKNQLEDEIARGDWLICDADMDLIFNLPYDDRWDAAYKKIGVDRTWLASEIGHA
2DO8 Chain:A ((8-176))--------KFIIATPEMDDEYFDRTVIYICEHNDNGTIGVIINTPTDLSVLELLTRMDFQMAKPRIYTQDQMVLNGGPVNQDRGFIVHSKTDHEFTHSYKVTDDITLTTSGDVLDSFGTQTAPEKFIVCLGCSTWKPHQLEQEIAQNYWLLSEANNQTLFETSYLDRWVEANEMLGI------------


General information:
TITO was launched using:
RESULT:

Template: 2DO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 689 -4007 -5.82 -24.43
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -5.82
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.287

(partial model without unconserved sides chains):
PDB file : Tito_2DO8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DO8-query.scw
PDB file : Tito_Scwrl_2DO8.pdb: