Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVLSKPQRKTQYNLRIDQELHEWLKEVAAKNERPVNYVINQAIKNMRKEIEGAKA
1PAR Chain:B ((3-50))-----GMSKMPQFNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGR---


General information:
TITO was launched using:
RESULT:

Template: 1PAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 65 -8441 -129.86 -175.85
target 2D structure prediction score : 0.85
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : -129.86
2D Compatibility (Sec. Struct. Predict.) : 0.85
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.606

(partial model without unconserved sides chains):
PDB file : Tito_1PAR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PAR-query.scw
PDB file : Tito_Scwrl_1PAR.pdb: