Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKQTLLYTGKAKSVYETDNADHLILVFRDDASAFNGEKIEQLDRKGKVNNRFNAFIMEKLAEAGIETHFEKLLSPTEVLVKKLQMIPVECVIRNYAAGSLCRRLGVEEGKELTPPTFELFYKDDGLGDPMVNESQAIALGWATAEQLEQMKVLTYKVNDVLKALFAEGNMILVDFKLEFGVFHDR---IVLGDEFSPDGCRLWDKDTKKKLDKDRFRQGLGGVVEAYEEVAARLGVDLSDI
2YZL Chain:A ((8-241))ILKKQPLYSGKAKSIYEIDD-DKVLIEFRDDITAG-GAKHDVKQGKGYLNALISSKLFEALEENGVKTHYIKYIEPRYMIAKKVEIIPIEVIVRNIAAGSLCRRYPFEEGKELPFPIVQFDYKNDEYGDPMLNEDIAVALGLATREELNKIKEIALKVNEVLKKLFDEKGIILVDFKIEIG--KDREGNLLVADEISPDTMRLWDKETRDVLDKDVFRKDLGDVIAKYRIVAERLGL-----


General information:
TITO was launched using:
RESULT:

Template: 2YZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1163 -44874 -38.58 -195.10
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : -38.58
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_2YZL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YZL-query.scw
PDB file : Tito_Scwrl_2YZL.pdb: