Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELNLKEDWSKKMKTALNRTPASFPVRRMDYNFEDTPRYWCNHEPSLTHYFTGLSTLFPEGESYFV-RSVRALRAK---AKENEILDREIGAFIGQEAMHSKEHHAFHVSAQ-QYGLNP-ES-----LEKATGIVLKAIEK-VFSKKWNLLVTVGLEHYTAVLVVSMMQSV--NELMTENTIRNLWLWHSVEETEHKAVAYDLYQHLYGNGLDAYIPRVGIFTFSLVLITAFSTIYHIVLMKRDKQLTNFKTWRNFFKFASKQYKVLIPKFLEYYRFDFHPNQTDEKALVAATKVKLGINDRSLLLS
3CHH Chain:B ((92-250))----------------------------------------------------GYNERVIATEQLIAEPAFDLVMHGVFPGSDDPLIRKSVQQAIVDESFHTYMHMLAIDRTRELRKISERPPQPELVTYRRLRRVLADMPEQWERDIAVLVWGAVAETCI----NALLALLARDA-TIQPMHSLITTLHLRDETAHGSIVVEVVRELY---------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 405 -15587 -38.49 -113.77
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain B : 0.57

3D Compatibility (PKB) : -38.49
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.217

(partial model without unconserved sides chains):
PDB file : Tito_3CHH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CHH-query.scw
PDB file : Tito_Scwrl_3CHH.pdb: