Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQALLLITSAIFISACSPYIVTANPNYSASKSDEKAEKIKNLFNEAHTTGVLVIQQGQTQQSYGNDLARASTEYVPASTFKMLNALIGLEHHKATTTEVFKWDGQKRLFPEWEKNMTLGDAMKASAIPVYQDLARRIGLELMSNEVKRIGYGNADIGTQVDNFWLVGPLKITPQQEAQFAYKLANKTLPFSQKVQDEVQSMLFIEEKNGNKIYAKSGWGWDVNPQVGWLTGWVVQPQGNIVAFSLNLEMKKGISSSVRKEITYRGLEQLGIL
5TG5 Chain:A ((2-245))----------------------------HISSQQHEKA--IKSYFDEAQTQGVIIIKEGKNLSTYGNALARANKEYVPASTF-MLNALIGLENHKATTNEIFKWDGKKRTYP-WEKDMTLGEAMALSAVPVYQELARRTGLELMQKEVKRVNFGNTNIGTQVDNFWLVGPLKITPVQEVNFADDLAHNRLPFKLETQEEVKKMLLIKEVNGSKIYAKSGWGMGVTPQVGWLTGWVEQANGKKIPFSLNLEMKEGMSGSIRNEITYKSLENLGII


General information:
TITO was launched using:
RESULT:

Template: 5TG5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1294 -104148 -80.48 -430.36
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -80.48
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.648

(partial model without unconserved sides chains):
PDB file : Tito_5TG5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TG5-query.scw
PDB file : Tito_Scwrl_5TG5.pdb: