Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLQAVYLTPIELHQTPDWSDRPYNIHRDPLWKTEKQGKEFDDVWFYHCDHLGTPQEMTDHTGAIIWKAEYKAWGECKAEK----AKSNFFENSEIISNNIRFQGQYFDEETGLHYNRYRYY-SPYVGRFVSKDPIGLLGGSNNYAYAPSPTEWVDPLGLSCQKIPKGFKSFGQLKQFGQAMQAGFSKLGFKGATMYMQGSAHSGRSFETGKAFDDGRVSDFDIAVVQPELFEKAKKMGIAKGNRTLPIEINSVEANKLGINGVLQKMSKLAGGRDVNVMIFDSPESAKAKAEGTRIPANCM
4RBM Chain:A ((125-231))----------------------------------------------------SPEELTNIIDKVLMYEKATMPDKSYLEKVLLIAGADYSWNSQVGQPTIKYGMQYYYNQEHGYTDVYNYLKAPYTGCY-SHLNTGV--SFANYTAHGSETAWADPLLTTSQ-------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 315 -2513 -7.98 -24.64
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -7.98
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.60
QMean score : -0.032

(partial model without unconserved sides chains):
PDB file : Tito_4RBM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RBM-query.scw
PDB file : Tito_Scwrl_4RBM.pdb: