Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKTSVIYPGTFDPITNGHVDLVTRASRMFDEVVVAIAIGHHKNPLFSLEERVALAQSSLGHLSNVEFVGFDGLLVNFFKEQKATAVLRGLRAVSDFEYEFQLANMNRQLDPHFEAVFLTPSEQYSFISSTLIREIARLKGDVTKFVPQAVVEAFERKHQQGW
3X1M Chain:A ((4-158))-----VLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFK---


General information:
TITO was launched using:
RESULT:

Template: 3X1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 733 -113203 -154.44 -730.34
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.91

3D Compatibility (PKB) : -154.44
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.611

(partial model without unconserved sides chains):
PDB file : Tito_3X1M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3X1M-query.scw
PDB file : Tito_Scwrl_3X1M.pdb: