Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDKKSVHRKTFKQEELILIKKLDLNETTVAMPENLFQLLIWTSDLAQHNHALFIQNKNELELVGENDQNKKQELTDKINFYKKNALIENQTKDFYLNKLLNQGDLAVKGYIQHPTRTQTKYAIIPYQGYDFITFATREII----EKFPIHFIDFKNEGAPQTLEDIHADTEELLSKVKDFVKSFREKYKEAVKKNKLIKEHNAAVHEIYIKIKNGEAKLIKDVAEEVPRVEETAPIQTVNSNEKPIKVIKKRKFALVKNE
5NOG Chain:A ((188-272))---------------------------------------------------------------------------------------------------------------------------ILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHE-----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5NOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 195 -3279 -16.82 -40.48
target 2D structure prediction score : 0.25
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -16.82
2D Compatibility (Sec. Struct. Predict.) : 0.25
1D Compatibility (Hydrophobicity) : 0.62
QMean score : -0.057

(partial model without unconserved sides chains):
PDB file : Tito_5NOG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5NOG-query.scw
PDB file : Tito_Scwrl_5NOG.pdb: