Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITANKGEWSEVYALFKLLSEGKLYAGDKDLNKIPNLIYPIISILRQESQDLLTYSPEPNHGVVHIQNGTSTFTISQSDFKGITELLLTEIKKKQPTASFSIPEVETFISQYNSKKIKAKSSAKSDIRIIIYDQKIGTTPELGFSIKSKLGKASTLLNASQATNFVYKVKNLTLSPQEIDDFNQLEFTVPIIQGRIHHLESLGGSVEFSHITNDVFNNNLILLDSLLPNIISEALYKYYTSPITSVKEIFEQVASANPIHYSLQHQHPFYEYKVKKLLCEIAIGMMPSTVWTGNNIDATGGYLVIKEDGDVICYHLYHRHEFEEYLYNNTRFEAASKSRHNYGNLFIENGELYMTLNLQIRFK
5C6B Chain:F ((128-174))-----------------------------------------------------------NKAVVSLSNGVSVLTSKVLDLKNYIDKQLLPIVNKQ---SCSIPNIETVI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5C6B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 66 -1868 -28.30 -39.74
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain F : 0.53

3D Compatibility (PKB) : -28.30
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_5C6B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C6B-query.scw
PDB file : Tito_Scwrl_5C6B.pdb: