Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAVNFNMRLEAELKEQVTPILEDYGLTMPQAFKLFLNQIVKTKAIPLSFDYARETALTPKAAAKLLQSLKEIENGEYTEYETVEEAIKAMSEEAHG
5HSM Chain:A ((36-103))--------RVGAVLRPEVSAALSPLGLTLPE-F-VCLRMLSQSPGLS-SAELARHASVTPQAMNTVLRKLED-------------------------


General information:
TITO was launched using:
RESULT:

Template: 5HSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 143 -27076 -189.34 -443.87
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -189.34
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.760

(partial model without unconserved sides chains):
PDB file : Tito_5HSM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HSM-query.scw
PDB file : Tito_Scwrl_5HSM.pdb: