Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEKFLDMSLVQRIVVGILVGILFGIFFPTW-------TFISILGTLFVSCLKAIAPILVF---FLTMASIAKHKIGNKTFVKPILILYLVGTLLSALVAVIVSSIFTVPITLQETVSEKA--PQSLESVLSTMLTNVTQNPVQSLIDANYLGVLFWAVLLGLAF-----------RARSESTKELVDQISIALSQVVQVIIAFAPIGILGLVYQSIATTGIAGLAEY------------LQLLLVLIGTMLFVALVVYPFLTFLFIKENPYPLIFFCLKESALPAFFTRSSAANIPINMMLAERLKLTKESYSISIPLGATINMGGAAITISLMTLTAVHSLGIEAPFVLKVLLCILSALAACGASGVAGGSLLLIPLACSLFGISNDVAMQIVGIGFIIGV--IQDSMETALNSSSDLLFTAIGELGARKRSGEKIKLKDCLDGLSER
3V8G Chain:A ((6-411))---KYIEYPVLQKILIGLILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLG-RVGVK-IVVYYLLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKICNGVMQYAPIGVFALIAYVMAEQGVHVVGELAKVTAAVYVGLTLQILLVY-----FVLLKIYGIDPISFIKHA---------KDAMLTAFVTRSSSGTLPVTMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVCAAYAMILGIDAILDMGRTMVNVTGDLTGTAI-------------------------


General information:
TITO was launched using:
RESULT:

Template: 3V8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1461 -193351 -132.34 -523.99
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -132.34
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.320

(partial model without unconserved sides chains):
PDB file : Tito_3V8G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V8G-query.scw
PDB file : Tito_Scwrl_3V8G.pdb: