Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEFLKEIIHNSWQEVLSSEFSKDYYLHLREFLKKEYASQKIHPDMYHIYEALELTPYEEVKVVILGQDPYHGENQAHGLSFSVQPGVKIPPSLRNIYKELYDDL-GIAPVQHGNLVSWAKQGVLLLNTVLTVREGQAYSHRGKGWERLTDTIIEKLNEREKPIVFILWGKPAQEKIKMIDKSRHIIITSPHPSPLSASRGFFGSKPFSKTNDALLALGEEPIDWQLPETV
3UFM Chain:A ((27-244))-----------WQEALLPEFSAPYFHELTDFLRQERKEYTIYPPAPDVFNALRYTPLGEVKVLILGQDPYHGPNQAHGLSFSVRPGVRVPPSLRNIYKELTEDIPGFVAPKHGYLRSWAEQGVLLLNAVLTVRAGQANSHQGKGWEHFTDAVIKAVNAKEERVVFILWGSYARKKKKLITGKNHVVIESGHPSPLS-EQYFFGTRPFSKTNEALEKAGRGPVEWQLPATV


General information:
TITO was launched using:
RESULT:

Template: 3UFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1100 -30465 -27.70 -140.39
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -27.70
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_3UFM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UFM-query.scw
PDB file : Tito_Scwrl_3UFM.pdb: