Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIKSERISLKHLLTVEALTDQEVMGLIRRGQEFKQGANWTPQKRQYFATNLFFENSTRTHKSFDVAEKKLGLEVIEFEASTSSVQKGETLYDTVLTMSALGVD-VAVIRHGDENYYDELIQSKTIQCSIINGGDGSGQHPTQCLLDLMTIYEEFGHFEGLKVAIVGDITHSRVAKSNMQMLKRLGAQVFFSGPREWYDDEFEVY--GHYMPLDELLDQVDVMMMLRVQHERHDGKESFSKEGYHQEHGLTVERAKKLQKHAIIMHPAPVNRDVELADSLVEGLQSRIVQQMSNGVFVRMAILEAVLNGKA
4BJH Chain:B ((32-316))---------MRSLISSLDLTREEVEEILKYAKEFKEGKEETIKAS---AVLFFSEPSTRTRLSFEKAARELGIETYLVSGSESSTVKGESFFDTLKTFEGLGFDYVVFRVPFVFFPYKEIV--KSLNLRLVNAGDGTHQHPSQGLIDFFTIKEHFGEVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIWLRLQKERQKENYIPSESSYFKQFGLTKERFEKVK---LYMHPGPVNRNVDIDHELVYTEKSLIQEQVKNGIPVRKAI---------


General information:
TITO was launched using:
RESULT:

Template: 4BJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1528 -24134 -15.79 -85.58
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -15.79
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.377

(partial model without unconserved sides chains):
PDB file : Tito_4BJH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BJH-query.scw
PDB file : Tito_Scwrl_4BJH.pdb: