Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEVFQTIINYVLNLGSAIFVPLIILILGLLAGMKLKKAFMSALTLGIAFSGMSMVIGYMSNAVSPASEALAKNTGISLPALDLGWTGAASITWSWSYAFIFFAVTIGVNFVLLLFNWTKTLNVDMWNVWGKALTAYLVYYVSGSLAAGFLTAMVQVILELKLGDMFQKHIQDLTGIPLVTVTHFMTSAAVLLLPFNMIMDKIPALNKRADTNALKKKIGIFSENSVMGFIIGLGLGFAAAYGVSGSLNLAIQTATALSLFPMISKMFMQSLSPLADAMSEFMKKRFKDREVYIGLDWPI-LAGRSEIWVTAILLVPVFIGYAIILPG-NQVLPL----AGIINYSIAVG-GLL---LTGGNLARMLILGIITM-PIYLYGATYLAPILSDLAEKSGAVEG-IKKGQLITWSSIEGPEFRVLFAEAFNRNILAIVGCVIFLGLFVLLYKYMIKAKVPSERYAELQK
4RP9 Chain:A ((15-195))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRM--GDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCG---FSIGHQ------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 509 -85050 -167.09 -503.25
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.50

3D Compatibility (PKB) : -167.09
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.241

(partial model without unconserved sides chains):
PDB file : Tito_4RP9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RP9-query.scw
PDB file : Tito_Scwrl_4RP9.pdb: