Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARLNVNPTRMELTRLKKQLTTATRGHKLLKDKQDELMRQFILLIRKNNQLRQEMEESMTEAMSDFVLANASITEPFIEELFVLPAENVDLSIVDKNIMSVKVPVMNFEYDEQLTDTPLEYGYLNSSAELDRSIDRFTTLLPKLLELTEIEKTCQLMASEIEKTRRRVNALEYMTIPQLEETIYYIRMKLEENERAEVTRLIKVKNMGTTD
3VR4 Chain:G ((13-213))------NPTRMELTRLKKQLTTATRGHKLLKDKQDELMRQFILLIRKNNELRQAIEKETQTAMKDFVLAKS-VEEAFIDELLAL--ENVSISVVEKNIMSVKVPLMNFQ-----------------NAELDRSIDGFTQLLPKLLKLAEVEKTCQLMAEEIEKTRRRVNALEYMTIPQLEETIYYIKMKLEENERAEVTRLIKVKNM----


General information:
TITO was launched using:
RESULT:

Template: 3VR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 405 -38835 -95.89 -214.56
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain G : 0.90

3D Compatibility (PKB) : -95.89
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.603

(partial model without unconserved sides chains):
PDB file : Tito_3VR4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VR4-query.scw
PDB file : Tito_Scwrl_3VR4.pdb: