Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEFKELEDFIGTHFIYTYDNGWEYEWYAKNDHTVDYRIHGGMVKGRWVKDQEADIVKLTDGVFKITWTEPTGTDVALDFMPNEKKLHGMIFFPKWVEEHPEITVTFQNEHIAEMEAAREKYETYPKLLVPEFATITYMGDAGIDNEDVISEEPYDGMPDDIRSGKYFDENYKRVK
4ALB Chain:A ((3-160))--------NFIGSHMIYTYENGWEAEIYIKNDHTIDYRIHSGMVAGRWVRDQEVNIVKLTEGVYKVSWTEPTGTDVSLNFMPNEKRMHGIIFFPKWVHEHPEITVCYQNDHIDLMKESREKYETYPKYVVPEFAEITFLKNEGVDNEEVISKAPYEGMTDDIRAGR----------


General information:
TITO was launched using:
RESULT:

Template: 4ALB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 786 -57832 -73.58 -366.03
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.93

3D Compatibility (PKB) : -73.58
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.590

(partial model without unconserved sides chains):
PDB file : Tito_4ALB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ALB-query.scw
PDB file : Tito_Scwrl_4ALB.pdb: