Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLTSYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIYSYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK
3L5Z Chain:B ((7-149))------------------------------------------------------------------------------------------SEVESKIIEFTIVGADEIIAEKLGISVGDFVYKIIRLRIIHSIPTIMEHTWMPIAVIPGVEASVLEESIYSYIQNKLGLKVGTSVVRVKGIRPDDKEKQFMNLTNQDFLMRVEQVAYLTDGRTFEYSYADHLPETFEFETVIT---


General information:
TITO was launched using:
RESULT:

Template: 3L5Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 617 -73895 -119.76 -516.74
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -119.76
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.277

(partial model without unconserved sides chains):
PDB file : Tito_3L5Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L5Z-query.scw
PDB file : Tito_Scwrl_3L5Z.pdb: