Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSLLGDHLLQRLQQDTEGKLHQRLFRCLRGAIIDGVIQPKTRLPASRDLASEIHVSRNTVLTAYEQLQAEGYLEALTGHGTWVAEKLPESFLNTQNKKKVVSSPNVQSSYALSQRGSNLLGYAAASPHQWGAFVPGAPDVTEFPHHIFSRIQAR-----LSREPDINRLIYSNAGGCIELRSALADYLRVAR---SVQCDA----DQIIITEGIHQAIDLVSRALSDMGDKVWIEDPAYWGMRNTLRINGLDIQPMPVDAEGIIPEENPA---------------VPPKLIFVTPSHQYPLGSHLSLDRRRQLIQIARQHNSWIVEDDYDSEFRFSGQPYPSLQGLENNAPVLYMGTFSKTIYPSLRIGYLVVPKPLFSPLRIVAAELYRGGHLLEQKALAEFIRE---GHYEAHIRRMRLLYGKRRDYLVSLIQRYLGPEF-IHEYDEAAGLHLVLKLPNSCDDVAIA-ATALERGVKVRPLSQYYMQSHAHAERGLLMGFACVNEKDMVMAFGVLLQYLREADVPTLN
5TF5 Chain:A ((30-424))-------------------------------------------------------------------------------------------------------------------------------PKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLT-GLAEWH-VPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSA-PSPYLRASFSSASPEQMDVAFQVLAQLIKES------


General information:
TITO was launched using:
RESULT:

Template: 5TF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1758 -29715 -16.90 -81.86
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -16.90
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_5TF5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TF5-query.scw
PDB file : Tito_Scwrl_5TF5.pdb: