Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKFLNPQYLFQLLSPCLLCEIGTREKYSLCKECWEQLPWLKQTIQRNDQSVLVACHYAYPINRIIQQFKYEQKLHYQTLLAEVLQQLK-FPKVQAIVPMPISKQRLTERGFNQSLLLANLLGKQLKIPVWQPVQRLNEHSQKGLSRLERFENIEQQFVALTQENRRYRRVLIIDDVITTGSSIHALSQALKQLGCTSIHASCLAAASSTSY
4M0K Chain:B ((58-179))--------------------------------------------------------------------------PELLRLAIEALLEPFQEQEITKVVGIES-------RGF----ILGGMLAHHLDAGFVP-VRKKGKLPYQTLAESYQLEYGTDTIEMHIDAIEPGDRVLIHDDVIATGGTAEATIRLVERAGGEVVGCAFLIELT----


General information:
TITO was launched using:
RESULT:

Template: 4M0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 595 -18445 -31.00 -152.44
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -31.00
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.385

(partial model without unconserved sides chains):
PDB file : Tito_4M0K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M0K-query.scw
PDB file : Tito_Scwrl_4M0K.pdb: